Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PtprkP35822 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC20.4■□□□□ 0.86
PtprkP35822 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC20.4■□□□□ 0.86
PtprkP35822 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC20.4■□□□□ 0.86
PtprkP35822 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PtprkP35822 Gm17889-201ENSMUST00000198410 598 ntBASIC20.4■□□□□ 0.86
PtprkP35822 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PtprkP35822 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC20.4■□□□□ 0.86
PtprkP35822 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC20.4■□□□□ 0.86
PtprkP35822 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
PtprkP35822 Gm10076-201ENSMUST00000073238 384 ntBASIC20.4■□□□□ 0.86
PtprkP35822 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC20.4■□□□□ 0.86
PtprkP35822 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 CT025610.1-201ENSMUST00000224552 1786 ntBASIC20.4■□□□□ 0.86
PtprkP35822 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PtprkP35822 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
PtprkP35822 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PtprkP35822 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
PtprkP35822 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PtprkP35822 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PtprkP35822 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PtprkP35822 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PtprkP35822 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Gm6506-201ENSMUST00000119775 1136 ntBASIC20.39■□□□□ 0.85
PtprkP35822 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Mir6546-201ENSMUST00000184460 62 ntBASIC20.39■□□□□ 0.85
PtprkP35822 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC20.39■□□□□ 0.85
PtprkP35822 Arhgef33-207ENSMUST00000224966 490 ntBASIC20.39■□□□□ 0.85
PtprkP35822 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC20.39■□□□□ 0.85
PtprkP35822 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC20.39■□□□□ 0.85
PtprkP35822 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC20.39■□□□□ 0.85
PtprkP35822 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC20.39■□□□□ 0.85
PtprkP35822 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PtprkP35822 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PtprkP35822 Gm23949-201ENSMUST00000104027 127 ntBASIC20.38■□□□□ 0.85
PtprkP35822 Gm5863-201ENSMUST00000121760 1008 ntBASIC20.38■□□□□ 0.85
PtprkP35822 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC20.38■□□□□ 0.85
PtprkP35822 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC20.38■□□□□ 0.85
PtprkP35822 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PtprkP35822 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PtprkP35822 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PtprkP35822 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PtprkP35822 Gm44401-201ENSMUST00000204462 2375 ntBASIC20.38■□□□□ 0.85
PtprkP35822 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PtprkP35822 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PtprkP35822 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PtprkP35822 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC20.37■□□□□ 0.85
PtprkP35822 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Gm9358-201ENSMUST00000183067 927 ntBASIC20.37■□□□□ 0.85
PtprkP35822 Aprt-ps-201ENSMUST00000212311 505 ntBASIC20.37■□□□□ 0.85
PtprkP35822 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC20.37■□□□□ 0.85
PtprkP35822 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
PtprkP35822 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC20.37■□□□□ 0.85
PtprkP35822 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PtprkP35822 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.37■□□□□ 0.85
PtprkP35822 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
PtprkP35822 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PtprkP35822 Gm15711-201ENSMUST00000118889 535 ntBASIC20.37■□□□□ 0.85
PtprkP35822 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PtprkP35822 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC20.37■□□□□ 0.85
PtprkP35822 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC20.37■□□□□ 0.85
PtprkP35822 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC20.37■□□□□ 0.85
PtprkP35822 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC20.37■□□□□ 0.85
PtprkP35822 Gm19166-201ENSMUST00000196041 1063 ntBASIC20.37■□□□□ 0.85
PtprkP35822 AY036118-201ENSMUST00000200021 923 ntBASIC20.37■□□□□ 0.85
PtprkP35822 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC20.37■□□□□ 0.85
PtprkP35822 AC156501.1-201ENSMUST00000228219 270 ntBASIC20.37■□□□□ 0.85
PtprkP35822 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PtprkP35822 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
PtprkP35822 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PtprkP35822 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PtprkP35822 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms