Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.06□□□□□ -0.48
Sftpa1P35242 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm15782-201ENSMUST00000121073 445 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm15547-201ENSMUST00000122152 333 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm26361-201ENSMUST00000158868 186 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm5904-201ENSMUST00000210286 865 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.05□□□□□ -0.48
Sftpa1P35242 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm8385-201ENSMUST00000058999 643 ntBASIC12.05□□□□□ -0.48
Sftpa1P35242 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sftpa1P35242 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sftpa1P35242 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sftpa1P35242 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.04□□□□□ -0.48
Sftpa1P35242 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.04□□□□□ -0.48
Sftpa1P35242 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Sftpa1P35242 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.04□□□□□ -0.48
Sftpa1P35242 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.04□□□□□ -0.48
Sftpa1P35242 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.04□□□□□ -0.48
Sftpa1P35242 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Gm22121-201ENSMUST00000175148 54 ntBASIC12.04□□□□□ -0.48
Sftpa1P35242 Gm8885-201ENSMUST00000189382 598 ntBASIC12.04□□□□□ -0.48
Sftpa1P35242 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.04□□□□□ -0.48
Sftpa1P35242 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.04□□□□□ -0.48
Sftpa1P35242 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.04□□□□□ -0.48
Sftpa1P35242 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sftpa1P35242 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sftpa1P35242 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sftpa1P35242 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms