Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Mmp13P33435 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Mmp13P33435 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.39□□□□□ -0.27
Mmp13P33435 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Mmp13P33435 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Mmp13P33435 Gm11918-201ENSMUST00000121660 179 ntBASIC13.39□□□□□ -0.27
Mmp13P33435 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
Mmp13P33435 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Mmp13P33435 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Mmp13P33435 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.39□□□□□ -0.27
Mmp13P33435 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Mmp13P33435 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.39□□□□□ -0.27
Mmp13P33435 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.39□□□□□ -0.27
Mmp13P33435 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.39□□□□□ -0.27
Mmp13P33435 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.39□□□□□ -0.27
Mmp13P33435 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp13P33435 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.38□□□□□ -0.27
Mmp13P33435 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.38□□□□□ -0.27
Mmp13P33435 Gm43094-201ENSMUST00000196549 921 ntBASIC13.38□□□□□ -0.27
Mmp13P33435 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.38□□□□□ -0.27
Mmp13P33435 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Mmp13P33435 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp13P33435 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mmp13P33435 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.37□□□□□ -0.27
Mmp13P33435 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mmp13P33435 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Mmp13P33435 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.37□□□□□ -0.27
Mmp13P33435 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Mmp13P33435 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.37□□□□□ -0.27
Mmp13P33435 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mmp13P33435 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.37□□□□□ -0.27
Mmp13P33435 Gm11524-201ENSMUST00000119349 807 ntBASIC13.37□□□□□ -0.27
Mmp13P33435 Gm12485-201ENSMUST00000119641 291 ntBASIC13.37□□□□□ -0.27
Mmp13P33435 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Mmp13P33435 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Mmp13P33435 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mmp13P33435 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms