Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Gm12058-201ENSMUST00000118614 437 ntBASIC14.96□□□□□ -0.01
Vcam1P29533 Gm25043-201ENSMUST00000158604 212 ntBASIC14.96□□□□□ -0.01
Vcam1P29533 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.96□□□□□ -0.01
Vcam1P29533 Gm38317-201ENSMUST00000195564 343 ntBASIC14.96□□□□□ -0.01
Vcam1P29533 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vcam1P29533 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.96□□□□□ -0.01
Vcam1P29533 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcam1P29533 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vcam1P29533 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vcam1P29533 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vcam1P29533 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.95□□□□□ -0.02
Vcam1P29533 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Vcam1P29533 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Vcam1P29533 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.95□□□□□ -0.02
Vcam1P29533 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.95□□□□□ -0.02
Vcam1P29533 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.95□□□□□ -0.02
Vcam1P29533 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.95□□□□□ -0.02
Vcam1P29533 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.95□□□□□ -0.02
Vcam1P29533 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.95□□□□□ -0.02
Vcam1P29533 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.95□□□□□ -0.02
Vcam1P29533 Gm8885-201ENSMUST00000189382 598 ntBASIC14.95□□□□□ -0.02
Vcam1P29533 AA914427-201ENSMUST00000193194 1166 ntBASIC14.95□□□□□ -0.02
Vcam1P29533 Gm44405-201ENSMUST00000198952 126 ntBASIC14.95□□□□□ -0.02
Vcam1P29533 Gm45186-201ENSMUST00000206874 478 ntBASIC14.95□□□□□ -0.02
Vcam1P29533 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Vcam1P29533 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vcam1P29533 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.95□□□□□ -0.02
Vcam1P29533 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Vcam1P29533 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vcam1P29533 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcam1P29533 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.94□□□□□ -0.02
Vcam1P29533 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Vcam1P29533 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.94□□□□□ -0.02
Vcam1P29533 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.94□□□□□ -0.02
Vcam1P29533 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.94□□□□□ -0.02
Vcam1P29533 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.94□□□□□ -0.02
Vcam1P29533 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Mir3102-201ENSMUST00000175555 104 ntBASIC14.94□□□□□ -0.02
Vcam1P29533 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.94□□□□□ -0.02
Vcam1P29533 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.94□□□□□ -0.02
Vcam1P29533 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.94□□□□□ -0.02
Vcam1P29533 Gm13097-201ENSMUST00000210722 397 ntBASIC14.94□□□□□ -0.02
Vcam1P29533 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.94□□□□□ -0.02
Vcam1P29533 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.94□□□□□ -0.02
Vcam1P29533 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.94□□□□□ -0.02
Vcam1P29533 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vcam1P29533 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Vcam1P29533 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms