Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.02□□□□□ -0.33
Nckap1P28660 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nckap1P28660 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nckap1P28660 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nckap1P28660 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nckap1P28660 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nckap1P28660 Mir874-201ENSMUST00000104769 76 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.01□□□□□ -0.33
Nckap1P28660 Gm13350-201ENSMUST00000120519 479 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.01□□□□□ -0.33
Nckap1P28660 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.01□□□□□ -0.33
Nckap1P28660 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.01□□□□□ -0.33
Nckap1P28660 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nckap1P28660 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Gm17208-201ENSMUST00000168388 535 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nckap1P28660 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.01□□□□□ -0.33
Nckap1P28660 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Gm18584-201ENSMUST00000203098 964 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.01□□□□□ -0.33
Nckap1P28660 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.01□□□□□ -0.33
Nckap1P28660 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.01□□□□□ -0.33
Nckap1P28660 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Nckap1P28660 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nckap1P28660 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nckap1P28660 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Nckap1P28660 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Nckap1P28660 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.01□□□□□ -0.33
Nckap1P28660 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nckap1P28660 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13□□□□□ -0.33
Nckap1P28660 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Nckap1P28660 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Nckap1P28660 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nckap1P28660 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13□□□□□ -0.33
Nckap1P28660 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nckap1P28660 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nckap1P28660 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Gm7809-201ENSMUST00000153199 742 ntBASIC13□□□□□ -0.33
Nckap1P28660 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13□□□□□ -0.33
Nckap1P28660 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13□□□□□ -0.33
Nckap1P28660 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13□□□□□ -0.33
Nckap1P28660 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nckap1P28660 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nckap1P28660 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Nckap1P28660 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nckap1P28660 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nckap1P28660 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nckap1P28660 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nckap1P28660 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nckap1P28660 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms