Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfrsf1bP25119 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf1bP25119 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm11978-201ENSMUST00000122315 466 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm28693-202ENSMUST00000190758 331 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm37497-201ENSMUST00000195830 798 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm10146-201ENSMUST00000072739 309 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms