Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
BdnfP21237 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.57□□□□□ -0.4
BdnfP21237 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.57□□□□□ -0.4
BdnfP21237 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.57□□□□□ -0.4
BdnfP21237 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.57□□□□□ -0.4
BdnfP21237 Gm12403-201ENSMUST00000121384 959 ntBASIC12.57□□□□□ -0.4
BdnfP21237 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
BdnfP21237 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
BdnfP21237 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.57□□□□□ -0.4
BdnfP21237 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.57□□□□□ -0.4
BdnfP21237 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.57□□□□□ -0.4
BdnfP21237 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.57□□□□□ -0.4
BdnfP21237 Gm29667-201ENSMUST00000190817 490 ntBASIC12.57□□□□□ -0.4
BdnfP21237 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.57□□□□□ -0.4
BdnfP21237 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.57□□□□□ -0.4
BdnfP21237 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
BdnfP21237 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
BdnfP21237 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
BdnfP21237 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
BdnfP21237 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
BdnfP21237 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.57□□□□□ -0.4
BdnfP21237 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
BdnfP21237 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
BdnfP21237 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.56□□□□□ -0.4
BdnfP21237 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
BdnfP21237 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
BdnfP21237 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.56□□□□□ -0.4
BdnfP21237 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
BdnfP21237 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BdnfP21237 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.56□□□□□ -0.4
BdnfP21237 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Gm27772-201ENSMUST00000184900 187 ntBASIC12.56□□□□□ -0.4
BdnfP21237 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.56□□□□□ -0.4
BdnfP21237 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.56□□□□□ -0.4
BdnfP21237 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.56□□□□□ -0.4
BdnfP21237 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Gm20445-201ENSMUST00000061905 565 ntBASIC12.56□□□□□ -0.4
BdnfP21237 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
BdnfP21237 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
BdnfP21237 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
BdnfP21237 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.56□□□□□ -0.4
BdnfP21237 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.56□□□□□ -0.4
BdnfP21237 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BdnfP21237 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BdnfP21237 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
BdnfP21237 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BdnfP21237 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.55□□□□□ -0.4
BdnfP21237 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.55□□□□□ -0.4
BdnfP21237 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.55□□□□□ -0.4
BdnfP21237 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms