Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Hoxc9P09633 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc9P09633 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.83■□□□□ 0.28
Hoxc9P09633 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc9P09633 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC16.83■□□□□ 0.28
Hoxc9P09633 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.83■□□□□ 0.28
Hoxc9P09633 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.83■□□□□ 0.28
Hoxc9P09633 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.83■□□□□ 0.28
Hoxc9P09633 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.83■□□□□ 0.28
Hoxc9P09633 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc9P09633 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc9P09633 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.83■□□□□ 0.28
Hoxc9P09633 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.83■□□□□ 0.28
Hoxc9P09633 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Hoxc9P09633 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc9P09633 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc9P09633 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.82■□□□□ 0.28
Hoxc9P09633 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Mir6927-201ENSMUST00000184494 71 ntBASIC16.82■□□□□ 0.28
Hoxc9P09633 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxc9P09633 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc9P09633 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Hoxc9P09633 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.81■□□□□ 0.28
Hoxc9P09633 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.81■□□□□ 0.28
Hoxc9P09633 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.81■□□□□ 0.28
Hoxc9P09633 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.81■□□□□ 0.28
Hoxc9P09633 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.81■□□□□ 0.28
Hoxc9P09633 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.81■□□□□ 0.28
Hoxc9P09633 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Hoxc9P09633 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc9P09633 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.8■□□□□ 0.28
Hoxc9P09633 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Hoxc9P09633 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.8■□□□□ 0.28
Hoxc9P09633 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc9P09633 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms