Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.85□□□□□ -0.19
TnfP06804 Gm12502-201ENSMUST00000120197 444 ntBASIC13.85□□□□□ -0.19
TnfP06804 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.85□□□□□ -0.19
TnfP06804 Gm43822-201ENSMUST00000200285 476 ntBASIC13.85□□□□□ -0.19
TnfP06804 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.85□□□□□ -0.19
TnfP06804 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.85□□□□□ -0.19
TnfP06804 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.85□□□□□ -0.19
TnfP06804 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Gm9368-201ENSMUST00000219348 831 ntBASIC13.85□□□□□ -0.19
TnfP06804 Gm5781-201ENSMUST00000219792 443 ntBASIC13.85□□□□□ -0.19
TnfP06804 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.85□□□□□ -0.19
TnfP06804 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.85□□□□□ -0.19
TnfP06804 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.85□□□□□ -0.19
TnfP06804 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TnfP06804 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TnfP06804 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TnfP06804 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.84□□□□□ -0.19
TnfP06804 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Gm15370-201ENSMUST00000117158 253 ntBASIC13.84□□□□□ -0.19
TnfP06804 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Gm14704-201ENSMUST00000120300 874 ntBASIC13.84□□□□□ -0.19
TnfP06804 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.84□□□□□ -0.19
TnfP06804 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TnfP06804 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.84□□□□□ -0.19
TnfP06804 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TnfP06804 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TnfP06804 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TnfP06804 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TnfP06804 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.83□□□□□ -0.19
TnfP06804 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TnfP06804 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TnfP06804 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TnfP06804 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TnfP06804 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
TnfP06804 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TnfP06804 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TnfP06804 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TnfP06804 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.83□□□□□ -0.2
TnfP06804 Gm12241-201ENSMUST00000118330 726 ntBASIC13.83□□□□□ -0.2
TnfP06804 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.83□□□□□ -0.2
TnfP06804 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
TnfP06804 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TnfP06804 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.83□□□□□ -0.2
TnfP06804 Gm3961-201ENSMUST00000204425 994 ntBASIC13.83□□□□□ -0.2
TnfP06804 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TnfP06804 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.83□□□□□ -0.2
TnfP06804 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.83□□□□□ -0.2
TnfP06804 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.83□□□□□ -0.2
TnfP06804 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.83□□□□□ -0.2
TnfP06804 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.83□□□□□ -0.2
TnfP06804 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.83□□□□□ -0.2
TnfP06804 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TnfP06804 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms