Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.48□□□□□ -0.57
P04224 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P04224 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.48□□□□□ -0.57
P04224 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.48□□□□□ -0.57
P04224 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P04224 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P04224 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
P04224 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
P04224 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
P04224 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Syt7-205ENSMUST00000224135 1557 ntBASIC11.47□□□□□ -0.57
P04224 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.47□□□□□ -0.57
P04224 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Gm9719-201ENSMUST00000162765 543 ntBASIC11.47□□□□□ -0.57
P04224 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.47□□□□□ -0.57
P04224 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.47□□□□□ -0.57
P04224 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.47□□□□□ -0.57
P04224 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
P04224 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
P04224 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
P04224 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
P04224 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P04224 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
P04224 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
P04224 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.46□□□□□ -0.57
P04224 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.46□□□□□ -0.57
P04224 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
P04224 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P04224 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.46□□□□□ -0.57
P04224 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.46□□□□□ -0.57
P04224 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
P04224 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.46□□□□□ -0.57
P04224 Gm5264-201ENSMUST00000190584 848 ntBASIC11.46□□□□□ -0.57
P04224 Gm6443-201ENSMUST00000203599 874 ntBASIC11.46□□□□□ -0.57
P04224 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms