Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.92□□□□□ -0.66
CfdP03953 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CfdP03953 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CfdP03953 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
CfdP03953 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CfdP03953 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CfdP03953 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CfdP03953 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
CfdP03953 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CfdP03953 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.91□□□□□ -0.66
CfdP03953 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
CfdP03953 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CfdP03953 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.91□□□□□ -0.66
CfdP03953 Gm15653-201ENSMUST00000119247 907 ntBASIC10.91□□□□□ -0.66
CfdP03953 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.91□□□□□ -0.66
CfdP03953 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.91□□□□□ -0.66
CfdP03953 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.91□□□□□ -0.66
CfdP03953 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.91□□□□□ -0.66
CfdP03953 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.91□□□□□ -0.66
CfdP03953 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.91□□□□□ -0.66
CfdP03953 Gm18733-201ENSMUST00000173950 856 ntBASIC10.91□□□□□ -0.66
CfdP03953 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.91□□□□□ -0.66
CfdP03953 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CfdP03953 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.91□□□□□ -0.66
CfdP03953 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
CfdP03953 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.91□□□□□ -0.66
CfdP03953 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CfdP03953 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CfdP03953 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CfdP03953 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CfdP03953 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.91□□□□□ -0.66
CfdP03953 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.91□□□□□ -0.66
CfdP03953 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CfdP03953 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.9□□□□□ -0.66
CfdP03953 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.9□□□□□ -0.66
CfdP03953 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.9□□□□□ -0.66
CfdP03953 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CfdP03953 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
CfdP03953 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.9□□□□□ -0.66
CfdP03953 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
CfdP03953 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Gm28630-201ENSMUST00000187806 498 ntBASIC10.9□□□□□ -0.66
CfdP03953 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CfdP03953 Gm5425-201ENSMUST00000214125 459 ntBASIC10.9□□□□□ -0.66
CfdP03953 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.9□□□□□ -0.66
CfdP03953 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CfdP03953 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.9□□□□□ -0.66
CfdP03953 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CfdP03953 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
CfdP03953 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
CfdP03953 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CfdP03953 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CfdP03953 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CfdP03953 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CfdP03953 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CfdP03953 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms