Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P01852 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
P01852 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P01852 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.97□□□□□ -0.49
P01852 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
P01852 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.97□□□□□ -0.49
P01852 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P01852 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Gm13829-201ENSMUST00000119600 138 ntBASIC11.97□□□□□ -0.49
P01852 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.97□□□□□ -0.49
P01852 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
P01852 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.97□□□□□ -0.49
P01852 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.97□□□□□ -0.49
P01852 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P01852 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.97□□□□□ -0.49
P01852 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.97□□□□□ -0.49
P01852 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P01852 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
P01852 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
P01852 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P01852 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01852 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.96□□□□□ -0.49
P01852 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
P01852 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
P01852 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Gm14350-201ENSMUST00000116642 640 ntBASIC11.96□□□□□ -0.49
P01852 Gm16202-201ENSMUST00000117532 544 ntBASIC11.96□□□□□ -0.49
P01852 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.96□□□□□ -0.49
P01852 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
P01852 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.96□□□□□ -0.49
P01852 Gm24644-201ENSMUST00000157114 139 ntBASIC11.96□□□□□ -0.49
P01852 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.96□□□□□ -0.49
P01852 Gm8810-201ENSMUST00000172895 754 ntBASIC11.96□□□□□ -0.49
P01852 Gm29649-201ENSMUST00000185649 419 ntBASIC11.96□□□□□ -0.49
P01852 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.96□□□□□ -0.49
P01852 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
P01852 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.96□□□□□ -0.49
P01852 Gm6266-201ENSMUST00000203844 806 ntBASIC11.96□□□□□ -0.49
P01852 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.96□□□□□ -0.49
P01852 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.96□□□□□ -0.49
P01852 Gm7561-201ENSMUST00000211203 886 ntBASIC11.96□□□□□ -0.49
P01852 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.96□□□□□ -0.49
P01852 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
P01852 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
P01852 Gm6091-201ENSMUST00000098307 165 ntBASIC11.96□□□□□ -0.49
P01852 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01852 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.96□□□□□ -0.5
P01852 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
P01852 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01852 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01852 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01852 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
P01852 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
P01852 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P01852 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.95□□□□□ -0.5
P01852 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms