Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01798 Gm27892-201ENSMUST00000185017 106 ntBASIC11.21□□□□□ -0.61
P01798 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P01798 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.21□□□□□ -0.61
P01798 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.21□□□□□ -0.61
P01798 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.21□□□□□ -0.61
P01798 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01798 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01798 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01798 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
P01798 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01798 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.21□□□□□ -0.61
P01798 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P01798 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
P01798 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
P01798 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.21□□□□□ -0.62
P01798 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01798 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
P01798 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.2□□□□□ -0.62
P01798 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.2□□□□□ -0.62
P01798 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.2□□□□□ -0.62
P01798 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.2□□□□□ -0.62
P01798 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
P01798 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.2□□□□□ -0.62
P01798 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.2□□□□□ -0.62
P01798 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.2□□□□□ -0.62
P01798 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.2□□□□□ -0.62
P01798 Mir1894-201ENSMUST00000122802 81 ntBASIC11.2□□□□□ -0.62
P01798 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Gm6266-201ENSMUST00000203844 806 ntBASIC11.2□□□□□ -0.62
P01798 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.2□□□□□ -0.62
P01798 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P01798 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.2□□□□□ -0.62
P01798 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.2□□□□□ -0.62
P01798 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
P01798 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01798 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.19□□□□□ -0.62
P01798 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
P01798 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
P01798 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.19□□□□□ -0.62
P01798 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.19□□□□□ -0.62
P01798 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
P01798 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Gm11524-201ENSMUST00000119349 807 ntBASIC11.19□□□□□ -0.62
P01798 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.19□□□□□ -0.62
P01798 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.19□□□□□ -0.62
P01798 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.19□□□□□ -0.62
P01798 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.19□□□□□ -0.62
P01798 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.19□□□□□ -0.62
P01798 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.19□□□□□ -0.62
P01798 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.19□□□□□ -0.62
P01798 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
P01798 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01798 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms