Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nr1i3O35627 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.04□□□□□ -0.16
Nr1i3O35627 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nr1i3O35627 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.04□□□□□ -0.16
Nr1i3O35627 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.04□□□□□ -0.16
Nr1i3O35627 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nr1i3O35627 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.04□□□□□ -0.16
Nr1i3O35627 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nr1i3O35627 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.04□□□□□ -0.16
Nr1i3O35627 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.04□□□□□ -0.16
Nr1i3O35627 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.04□□□□□ -0.16
Nr1i3O35627 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Nr1i3O35627 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nr1i3O35627 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.03□□□□□ -0.16
Nr1i3O35627 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Gm18624-201ENSMUST00000220966 658 ntBASIC14.03□□□□□ -0.16
Nr1i3O35627 Gm16372-201ENSMUST00000073088 450 ntBASIC14.03□□□□□ -0.16
Nr1i3O35627 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.03□□□□□ -0.16
Nr1i3O35627 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.03□□□□□ -0.16
Nr1i3O35627 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nr1i3O35627 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nr1i3O35627 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nr1i3O35627 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.02□□□□□ -0.16
Nr1i3O35627 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nr1i3O35627 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Gm6152-201ENSMUST00000151704 340 ntBASIC14.02□□□□□ -0.17
Nr1i3O35627 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.02□□□□□ -0.17
Nr1i3O35627 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.02□□□□□ -0.17
Nr1i3O35627 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.02□□□□□ -0.17
Nr1i3O35627 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.02□□□□□ -0.17
Nr1i3O35627 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.02□□□□□ -0.17
Nr1i3O35627 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nr1i3O35627 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nr1i3O35627 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms