Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Polr1aO35134 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Gm5639-201ENSMUST00000122305 2403 ntBASIC19.72■□□□□ 0.75
Polr1aO35134 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Gm15711-201ENSMUST00000118889 535 ntBASIC19.72■□□□□ 0.75
Polr1aO35134 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC19.72■□□□□ 0.75
Polr1aO35134 Gm18038-201ENSMUST00000197900 485 ntBASIC19.72■□□□□ 0.75
Polr1aO35134 Gm44545-201ENSMUST00000208262 746 ntBASIC19.72■□□□□ 0.75
Polr1aO35134 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC19.72■□□□□ 0.75
Polr1aO35134 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Polr1aO35134 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr1aO35134 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.72■□□□□ 0.75
Polr1aO35134 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Polr1aO35134 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Polr1aO35134 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC19.71■□□□□ 0.75
Polr1aO35134 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Polr1aO35134 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Gm12196-201ENSMUST00000120954 262 ntBASIC19.71■□□□□ 0.75
Polr1aO35134 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Polr1aO35134 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Polr1aO35134 Gm44551-201ENSMUST00000208804 171 ntBASIC19.71■□□□□ 0.75
Polr1aO35134 Gm270-201ENSMUST00000223010 976 ntBASIC19.71■□□□□ 0.75
Polr1aO35134 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC19.7■□□□□ 0.74
Polr1aO35134 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC19.7■□□□□ 0.74
Polr1aO35134 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.7■□□□□ 0.74
Polr1aO35134 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC19.7■□□□□ 0.74
Polr1aO35134 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC19.7■□□□□ 0.74
Polr1aO35134 Gm3508-201ENSMUST00000186012 792 ntBASIC19.7■□□□□ 0.74
Polr1aO35134 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC19.7■□□□□ 0.74
Polr1aO35134 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC19.7■□□□□ 0.74
Polr1aO35134 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC19.7■□□□□ 0.74
Polr1aO35134 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC19.7■□□□□ 0.74
Polr1aO35134 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Polr1aO35134 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr1aO35134 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC19.69■□□□□ 0.74
Polr1aO35134 Gm45342-201ENSMUST00000210903 1363 ntBASIC19.69■□□□□ 0.74
Polr1aO35134 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Polr1aO35134 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC19.69■□□□□ 0.74
Polr1aO35134 Gm45118-201ENSMUST00000208928 825 ntBASIC19.69■□□□□ 0.74
Polr1aO35134 Mir219a-1-201ENSMUST00000083621 110 ntBASIC19.69■□□□□ 0.74
Polr1aO35134 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC19.69■□□□□ 0.74
Polr1aO35134 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Polr1aO35134 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC19.69■□□□□ 0.74
Polr1aO35134 AC154262.2-201ENSMUST00000224310 2293 ntBASIC19.69■□□□□ 0.74
Polr1aO35134 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr1aO35134 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.69■□□□□ 0.74
Polr1aO35134 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms