Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hdac1O09106 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Hdac1O09106 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Hdac1O09106 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.55■□□□□ 0.08
Hdac1O09106 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Gm13689-201ENSMUST00000119360 685 ntBASIC15.55■□□□□ 0.08
Hdac1O09106 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Gm24694-201ENSMUST00000180054 110 ntBASIC15.55■□□□□ 0.08
Hdac1O09106 Gm27663-201ENSMUST00000184839 110 ntBASIC15.55■□□□□ 0.08
Hdac1O09106 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hdac1O09106 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.55■□□□□ 0.08
Hdac1O09106 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hdac1O09106 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.54■□□□□ 0.08
Hdac1O09106 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hdac1O09106 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.54■□□□□ 0.08
Hdac1O09106 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.54■□□□□ 0.08
Hdac1O09106 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Hdac1O09106 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hdac1O09106 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hdac1O09106 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.54■□□□□ 0.08
Hdac1O09106 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hdac1O09106 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.54■□□□□ 0.08
Hdac1O09106 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hdac1O09106 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.54■□□□□ 0.08
Hdac1O09106 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hdac1O09106 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.53■□□□□ 0.08
Hdac1O09106 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.53■□□□□ 0.08
Hdac1O09106 Gm15321-201ENSMUST00000121290 288 ntBASIC15.53■□□□□ 0.08
Hdac1O09106 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.53■□□□□ 0.08
Hdac1O09106 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.53■□□□□ 0.08
Hdac1O09106 Gm28760-201ENSMUST00000185995 736 ntBASIC15.53■□□□□ 0.08
Hdac1O09106 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.53■□□□□ 0.08
Hdac1O09106 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.53■□□□□ 0.08
Hdac1O09106 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.53■□□□□ 0.08
Hdac1O09106 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.53■□□□□ 0.08
Hdac1O09106 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.53■□□□□ 0.08
Hdac1O09106 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hdac1O09106 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Hdac1O09106 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hdac1O09106 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hdac1O09106 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hdac1O09106 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac1O09106 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac1O09106 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Hdac1O09106 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.52■□□□□ 0.08
Hdac1O09106 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Hdac1O09106 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Hdac1O09106 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Hdac1O09106 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Hdac1O09106 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac1O09106 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac1O09106 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac1O09106 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hdac1O09106 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.52■□□□□ 0.08
Hdac1O09106 Gm14719-201ENSMUST00000121891 340 ntBASIC15.52■□□□□ 0.08
Hdac1O09106 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.52■□□□□ 0.08
Hdac1O09106 Gm37935-201ENSMUST00000192012 982 ntBASIC15.52■□□□□ 0.08
Hdac1O09106 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Hdac1O09106 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms