Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm43947-201ENSMUST00000203019 959 ntBASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcf11G3X9Z4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Abhd11os-203ENSMUST00000222613 363 ntBASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcf11G3X9Z4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Gm18734-201ENSMUST00000172937 808 ntBASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 AC159205.5-202ENSMUST00000224849 386 ntBASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Gm5884-201ENSMUST00000036712 1479 ntBASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Gm9333-201ENSMUST00000205452 1323 ntBASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcf11G3X9Z4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Gm18626-201ENSMUST00000221512 1409 ntBASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Pcf11G3X9Z4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Gm5616-201ENSMUST00000165252 384 ntBASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Gm8741-201ENSMUST00000174736 384 ntBASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Gm5070-201ENSMUST00000177599 862 ntBASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Gm5369-201ENSMUST00000217499 588 ntBASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms