Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim55G3X8Y1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim55G3X8Y1 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.4□□□□□ -0.26
Trim55G3X8Y1 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim55G3X8Y1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.4□□□□□ -0.27
Trim55G3X8Y1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim55G3X8Y1 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.39□□□□□ -0.27
Trim55G3X8Y1 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms