Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 AC159103.1-201ENSMUST00000228325 429 ntBASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hfm1D3Z4R1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Gm12501-201ENSMUST00000119163 529 ntBASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Gm14460-201ENSMUST00000121511 639 ntBASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Gm270-201ENSMUST00000223010 976 ntBASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 AC154252.2-201ENSMUST00000223593 767 ntBASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Gm2420-202ENSMUST00000202224 2249 ntBASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Hfm1D3Z4R1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Gm18626-201ENSMUST00000221512 1409 ntBASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Mir6958-201ENSMUST00000184207 73 ntBASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hfm1D3Z4R1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Hfm1D3Z4R1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hfm1D3Z4R1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hfm1D3Z4R1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hfm1D3Z4R1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Hfm1D3Z4R1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Hfm1D3Z4R1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Gm4482-201ENSMUST00000200876 742 ntBASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Gm1821-202ENSMUST00000227415 750 ntBASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Gm9996-201ENSMUST00000070359 913 ntBASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Gm14752-201ENSMUST00000120719 2075 ntBASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms