Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gm4804-201ENSMUST00000182234 999 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gm29541-201ENSMUST00000191351 678 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm24543-201ENSMUST00000103867 82 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm12260-201ENSMUST00000122447 411 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm25948-201ENSMUST00000175334 112 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.55□□□□□ -0.72
Gm12887B1AVM1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms