Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col4a6B1AVK5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm23251-201ENSMUST00000103773 110 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm12165-201ENSMUST00000117047 342 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm11989-201ENSMUST00000117240 672 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm7851-201ENSMUST00000117574 323 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm11362-201ENSMUST00000118838 850 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm12196-201ENSMUST00000120954 262 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm10752-201ENSMUST00000218348 729 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm270-201ENSMUST00000223010 976 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a6B1AVK5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Gm14058-201ENSMUST00000116082 735 ntBASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Gm8365-201ENSMUST00000197334 648 ntBASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col4a6B1AVK5 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.15□□□□□ -0.31
Col4a6B1AVK5 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col4a6B1AVK5 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.15□□□□□ -0.31
Col4a6B1AVK5 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.31
Col4a6B1AVK5 Gm43058-201ENSMUST00000197645 625 ntBASIC13.15□□□□□ -0.31
Col4a6B1AVK5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.15□□□□□ -0.31
Col4a6B1AVK5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Col4a6B1AVK5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col4a6B1AVK5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col4a6B1AVK5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col4a6B1AVK5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms