Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Gm6888-201ENSMUST00000221983 706 ntBASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.61□□□□□ -0.55
Gm11127A7VMS2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Gm8927-201ENSMUST00000181978 981 ntBASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Gm3222-201ENSMUST00000071282 990 ntBASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.6□□□□□ -0.55
Gm11127A7VMS2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Gm44344-201ENSMUST00000200287 129 ntBASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm11127A7VMS2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms