Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm11597-201ENSMUST00000121423 964 ntBASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm13570-201ENSMUST00000140763 309 ntBASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Mir433-201ENSMUST00000093564 124 ntBASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Gm13315-201ENSMUST00000120376 991 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Gm25700-201ENSMUST00000177693 110 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Gm44967-201ENSMUST00000207047 631 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3aA2ASI5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gm37466-201ENSMUST00000195692 652 ntBASIC14.42□□□□□ -0.1
Scn3aA2ASI5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gm45224-201ENSMUST00000208203 414 ntBASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gm5363-201ENSMUST00000211927 938 ntBASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3aA2ASI5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Grk6-205ENSMUST00000224653 2976 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms