Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm21854-201ENSMUST00000179901 471 ntBASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm43094-201ENSMUST00000196549 921 ntBASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm44872-201ENSMUST00000207864 420 ntBASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm9797-201ENSMUST00000052902 613 ntBASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
H2afb3S4R1G7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Gm11524-201ENSMUST00000119349 807 ntBASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Gm19931-201ENSMUST00000198920 368 ntBASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.81□□□□□ -0.52
H2afb3S4R1G7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb3S4R1G7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms