Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cldn9Q9Z0S7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gm14350-201ENSMUST00000116642 640 ntBASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gm12928-201ENSMUST00000117115 573 ntBASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gm16202-201ENSMUST00000117532 544 ntBASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gm18473-201ENSMUST00000220543 868 ntBASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Gm16372-201ENSMUST00000073088 450 ntBASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cldn9Q9Z0S7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cldn9Q9Z0S7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cldn9Q9Z0S7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cldn9Q9Z0S7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gm11978-201ENSMUST00000122315 466 ntBASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gm27701-201ENSMUST00000184498 110 ntBASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gm2495-201ENSMUST00000191160 466 ntBASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gm44069-201ENSMUST00000204898 506 ntBASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms