Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm4986-201ENSMUST00000119731 549 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm8227-201ENSMUST00000223306 571 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm8738-201ENSMUST00000172606 329 ntBASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm23363-201ENSMUST00000175024 79 ntBASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm7783-201ENSMUST00000204795 781 ntBASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm10608-202ENSMUST00000213924 676 ntBASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcb1Q9Z0H3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms