Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx9Q9WUH2 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.46□□□□□ -0.42
Lhx9Q9WUH2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Gm44069-201ENSMUST00000204898 506 ntBASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx9Q9WUH2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Gm22018-201ENSMUST00000104357 131 ntBASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Snora73a-201ENSMUST00000082453 205 ntBASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx9Q9WUH2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Mir686-201ENSMUST00000102174 109 ntBASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Gm19931-201ENSMUST00000198920 368 ntBASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.43□□□□□ -0.42
Lhx9Q9WUH2 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms