Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.2□□□□□ -0.78
CcsQ9WU84 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
CcsQ9WU84 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CcsQ9WU84 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CcsQ9WU84 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CcsQ9WU84 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.2□□□□□ -0.78
CcsQ9WU84 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CcsQ9WU84 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CcsQ9WU84 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.19□□□□□ -0.78
CcsQ9WU84 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.19□□□□□ -0.78
CcsQ9WU84 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.19□□□□□ -0.78
CcsQ9WU84 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.19□□□□□ -0.78
CcsQ9WU84 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Gm8410-201ENSMUST00000117225 605 ntBASIC10.19□□□□□ -0.78
CcsQ9WU84 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.19□□□□□ -0.78
CcsQ9WU84 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Gm27622-201ENSMUST00000183779 60 ntBASIC10.19□□□□□ -0.78
CcsQ9WU84 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.19□□□□□ -0.78
CcsQ9WU84 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
CcsQ9WU84 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CcsQ9WU84 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CcsQ9WU84 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CcsQ9WU84 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Gm28630-201ENSMUST00000187806 498 ntBASIC10.18□□□□□ -0.78
CcsQ9WU84 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.18□□□□□ -0.78
CcsQ9WU84 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms