Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Gm43818-201ENSMUST00000200605 466 ntBASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubd1Q9R1K7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Gm4984-201ENSMUST00000115987 360 ntBASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubd1Q9R1K7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Gm1335-201ENSMUST00000121653 386 ntBASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubd1Q9R1K7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms