Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gm12928-201ENSMUST00000117115 573 ntBASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Gm8463-201ENSMUST00000208573 613 ntBASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf40aQ9R1C7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Gm5687-201ENSMUST00000118252 640 ntBASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Gm9002-201ENSMUST00000178437 499 ntBASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Gm18473-201ENSMUST00000220543 868 ntBASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Itm2b-204ENSMUST00000228637 783 ntBASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf40aQ9R1C7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms