Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.67□□□□□ -0.54
Nubp2Q9R061 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.67□□□□□ -0.54
Nubp2Q9R061 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.67□□□□□ -0.54
Nubp2Q9R061 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nubp2Q9R061 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.66□□□□□ -0.54
Nubp2Q9R061 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.66□□□□□ -0.54
Nubp2Q9R061 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Gm15678-201ENSMUST00000117573 960 ntBASIC11.66□□□□□ -0.54
Nubp2Q9R061 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.66□□□□□ -0.54
Nubp2Q9R061 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.66□□□□□ -0.54
Nubp2Q9R061 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nubp2Q9R061 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Gm14127-201ENSMUST00000117906 678 ntBASIC11.65□□□□□ -0.54
Nubp2Q9R061 Gm12485-201ENSMUST00000119641 291 ntBASIC11.65□□□□□ -0.54
Nubp2Q9R061 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Gm26464-201ENSMUST00000157094 305 ntBASIC11.65□□□□□ -0.54
Nubp2Q9R061 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.65□□□□□ -0.54
Nubp2Q9R061 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms