Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm12403-201ENSMUST00000121384 959 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm26464-201ENSMUST00000157094 305 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm8515-201ENSMUST00000194852 576 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61a2Q9JLR1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Gm5745-201ENSMUST00000183748 313 ntBASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Gm38144-201ENSMUST00000192790 465 ntBASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Gm42550-201ENSMUST00000201553 960 ntBASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Sec61a2Q9JLR1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms