Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ube4bQ9ES00 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm25911-201ENSMUST00000157621 56 ntBASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ube4bQ9ES00 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Gm11745-201ENSMUST00000121669 448 ntBASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ube4bQ9ES00 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms