Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm24830-201ENSMUST00000102024 166 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm25890-201ENSMUST00000177643 165 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm22614-201ENSMUST00000178300 165 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm43138-201ENSMUST00000199123 708 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm22042-201ENSMUST00000082989 165 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm26232-201ENSMUST00000083360 166 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm24136-201ENSMUST00000083374 165 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm26110-201ENSMUST00000083971 165 ntBASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp8Q9DB85 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm14017-201ENSMUST00000121934 386 ntBASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm11978-201ENSMUST00000122315 466 ntBASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rrp8Q9DB85 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms