Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Gm11434-201ENSMUST00000122379 629 ntBASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gtf3c6Q9D8P7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Mir6392-201ENSMUST00000184924 108 ntBASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Gm15823-201ENSMUST00000064305 670 ntBASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Gm2423-201ENSMUST00000074863 733 ntBASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gtf3c6Q9D8P7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 AC121870.2-201ENSMUST00000214343 1870 ntBASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms