Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm37042-201ENSMUST00000193816 581 ntBASIC17.2■□□□□ 0.34
U2af1Q9D883 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.2■□□□□ 0.34
U2af1Q9D883 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Gm10478-201ENSMUST00000084451 396 ntBASIC17.2■□□□□ 0.34
U2af1Q9D883 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
U2af1Q9D883 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
U2af1Q9D883 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Gm22018-201ENSMUST00000104357 131 ntBASIC17.19■□□□□ 0.34
U2af1Q9D883 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Gm25261-201ENSMUST00000157416 134 ntBASIC17.19■□□□□ 0.34
U2af1Q9D883 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Gm6222-202ENSMUST00000182143 629 ntBASIC17.19■□□□□ 0.34
U2af1Q9D883 Gm27572-201ENSMUST00000183702 255 ntBASIC17.19■□□□□ 0.34
U2af1Q9D883 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
U2af1Q9D883 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
U2af1Q9D883 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC17.18■□□□□ 0.34
U2af1Q9D883 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Gm37008-201ENSMUST00000195712 319 ntBASIC17.18■□□□□ 0.34
U2af1Q9D883 Gm42693-201ENSMUST00000196779 631 ntBASIC17.18■□□□□ 0.34
U2af1Q9D883 Gm4768-201ENSMUST00000206199 686 ntBASIC17.18■□□□□ 0.34
U2af1Q9D883 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.18■□□□□ 0.34
U2af1Q9D883 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.18■□□□□ 0.34
U2af1Q9D883 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.18■□□□□ 0.34
U2af1Q9D883 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC17.18■□□□□ 0.34
U2af1Q9D883 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2af1Q9D883 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.17■□□□□ 0.34
U2af1Q9D883 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
U2af1Q9D883 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
U2af1Q9D883 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
U2af1Q9D883 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.17■□□□□ 0.34
U2af1Q9D883 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
U2af1Q9D883 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.17■□□□□ 0.34
U2af1Q9D883 Gm19184-201ENSMUST00000196798 928 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms