Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chaf1bQ9D0N7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Gm27622-201ENSMUST00000183779 60 ntBASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Gm10253-201ENSMUST00000194270 940 ntBASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chaf1bQ9D0N7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gm25948-201ENSMUST00000175334 112 ntBASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gm27533-201ENSMUST00000183800 152 ntBASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Mir7221-201ENSMUST00000184009 72 ntBASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chaf1bQ9D0N7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Pck2-205ENSMUST00000226352 2784 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms