Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm40466-201ENSMUST00000212174 422 ntBASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Gm29705-201ENSMUST00000212598 474 ntBASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.94□□□□□ -0.66
Ssbp3Q9D032 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.94□□□□□ -0.66
Ssbp3Q9D032 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.94□□□□□ -0.66
Ssbp3Q9D032 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ssbp3Q9D032 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Gm14350-201ENSMUST00000116642 640 ntBASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Gm12742-201ENSMUST00000117326 410 ntBASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Gm27331-201ENSMUST00000183705 60 ntBASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Gm37922-201ENSMUST00000195596 455 ntBASIC10.93□□□□□ -0.66
Ssbp3Q9D032 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ssbp3Q9D032 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm6447-201ENSMUST00000118905 835 ntBASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm14660-201ENSMUST00000119809 575 ntBASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms