Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lrrc40Q9CRC8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrrc40Q9CRC8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lrrc40Q9CRC8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrrc40Q9CRC8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrrc40Q9CRC8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lrrc40Q9CRC8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lrrc40Q9CRC8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lrrc40Q9CRC8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Gm16202-201ENSMUST00000117532 544 ntBASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Gm16372-201ENSMUST00000073088 450 ntBASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Gm2423-201ENSMUST00000074863 733 ntBASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lrrc40Q9CRC8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gm15544-201ENSMUST00000118776 1531 ntBASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gm14350-201ENSMUST00000116642 640 ntBASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gm6152-201ENSMUST00000151704 340 ntBASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gm5866-201ENSMUST00000177881 973 ntBASIC13□□□□□ -0.33
Lrrc40Q9CRC8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gm45668-201ENSMUST00000211271 493 ntBASIC13□□□□□ -0.33
Lrrc40Q9CRC8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrc40Q9CRC8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Gm10576-201ENSMUST00000191927 825 ntBASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 Gm44069-201ENSMUST00000204898 506 ntBASIC12.99□□□□□ -0.33
Lrrc40Q9CRC8 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms