Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm44069-201ENSMUST00000204898 506 ntBASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Rpa3Q9CQ71 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa3Q9CQ71 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa3Q9CQ71 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpa3Q9CQ71 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpa3Q9CQ71 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpa3Q9CQ71 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpa3Q9CQ71 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms