Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Gm6447-201ENSMUST00000118905 835 ntBASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb1Q9CQ70 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Gm16215-201ENSMUST00000161990 637 ntBASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb1Q9CQ70 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H2afb1Q9CQ70 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms