Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm45925-201ENSMUST00000218882 744 ntBASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.97□□□□□ -0.33
Cdh23Q99PF4 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.97□□□□□ -0.33
Cdh23Q99PF4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Gm11979-201ENSMUST00000119629 743 ntBASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh23Q99PF4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh23Q99PF4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Gm15036-201ENSMUST00000118880 400 ntBASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Gm14585-201ENSMUST00000120713 634 ntBASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Gm43962-201ENSMUST00000203898 190 ntBASIC12.96□□□□□ -0.34
Cdh23Q99PF4 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh23Q99PF4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm15595-201ENSMUST00000120840 961 ntBASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm14005-208ENSMUST00000223654 681 ntBASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms