Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gm13996-201ENSMUST00000118456 430 ntBASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gm18734-201ENSMUST00000172937 808 ntBASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gm16372-201ENSMUST00000073088 450 ntBASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gm26315-201ENSMUST00000083890 321 ntBASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm11531-201ENSMUST00000117614 555 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm13600-201ENSMUST00000117949 744 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm7541-201ENSMUST00000118361 535 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm23218-201ENSMUST00000158124 276 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm17391-201ENSMUST00000171036 126 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm6867-201ENSMUST00000219165 425 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm17330-201ENSMUST00000221047 165 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col25a1Q99MQ5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms