Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm5187-201ENSMUST00000117317 991 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Mir7221-201ENSMUST00000184009 72 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm10478-201ENSMUST00000084451 396 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lysmd3Q99LE3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lysmd3Q99LE3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Lysmd3Q99LE3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lysmd3Q99LE3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Lysmd3Q99LE3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Lysmd3Q99LE3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.58□□□□□ -0.23
Lysmd3Q99LE3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.58□□□□□ -0.23
Lysmd3Q99LE3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Lysmd3Q99LE3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Lysmd3Q99LE3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Gm26185-201ENSMUST00000157692 266 ntBASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Gm27572-201ENSMUST00000183702 255 ntBASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lysmd3Q99LE3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms