Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rfc4Q99J62 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rfc4Q99J62 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rfc4Q99J62 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Rfc4Q99J62 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rfc4Q99J62 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.05■□□□□ 0
Rfc4Q99J62 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Rfc4Q99J62 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Rfc4Q99J62 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rfc4Q99J62 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.05■□□□□ -0
Rfc4Q99J62 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.05■□□□□ -0
Rfc4Q99J62 Gm2260-201ENSMUST00000184965 657 ntBASIC15.05■□□□□ -0
Rfc4Q99J62 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.05■□□□□ -0
Rfc4Q99J62 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rfc4Q99J62 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Rfc4Q99J62 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Rfc4Q99J62 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Rfc4Q99J62 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc4Q99J62 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Rfc4Q99J62 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.04■□□□□ -0
Rfc4Q99J62 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.04■□□□□ -0
Rfc4Q99J62 Gm44967-201ENSMUST00000207047 631 ntBASIC15.04■□□□□ -0
Rfc4Q99J62 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.04■□□□□ -0
Rfc4Q99J62 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rfc4Q99J62 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfc4Q99J62 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc4Q99J62 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.03■□□□□ -0
Rfc4Q99J62 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.03■□□□□ -0
Rfc4Q99J62 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.03■□□□□ -0
Rfc4Q99J62 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.03■□□□□ -0
Rfc4Q99J62 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.03■□□□□ -0
Rfc4Q99J62 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.03■□□□□ -0
Rfc4Q99J62 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Gm23270-201ENSMUST00000104055 131 ntBASIC15.03■□□□□ -0
Rfc4Q99J62 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Gm15276-201ENSMUST00000145953 498 ntBASIC15.03■□□□□ -0
Rfc4Q99J62 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.03■□□□□ -0
Rfc4Q99J62 Gm22902-201ENSMUST00000158488 302 ntBASIC15.03■□□□□ -0
Rfc4Q99J62 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Rfc4Q99J62 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.03■□□□□ -0
Rfc4Q99J62 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Gm38317-201ENSMUST00000195564 343 ntBASIC15.03■□□□□ -0
Rfc4Q99J62 Gm5904-201ENSMUST00000210286 865 ntBASIC15.03■□□□□ -0
Rfc4Q99J62 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.03■□□□□ -0
Rfc4Q99J62 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.03■□□□□ -0
Rfc4Q99J62 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms