Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thumpd1Q99J36 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.67□□□□□ -0.54
Thumpd1Q99J36 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Thumpd1Q99J36 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm44344-201ENSMUST00000200287 129 ntBASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.66□□□□□ -0.54
Thumpd1Q99J36 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms