Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb1Q91Y08 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Gm6458-201ENSMUST00000211573 635 ntBASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb1Q91Y08 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Gm8598-201ENSMUST00000221184 836 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms