Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Gm16479-201ENSMUST00000121706 932 ntBASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Gm13786-201ENSMUST00000122371 333 ntBASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb18Q91Y02 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb18Q91Y02 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb18Q91Y02 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb18Q91Y02 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb18Q91Y02 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb18Q91Y02 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb18Q91Y02 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.71□□□□□ -0.22
Pcdhb18Q91Y02 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb18Q91Y02 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gm15370-201ENSMUST00000117158 253 ntBASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gm11591-201ENSMUST00000120063 702 ntBASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gm11637-201ENSMUST00000120601 592 ntBASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gm37489-201ENSMUST00000191883 159 ntBASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gm19163-201ENSMUST00000223313 780 ntBASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb18Q91Y02 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Gm15236-201ENSMUST00000117309 379 ntBASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Gm18056-201ENSMUST00000207670 568 ntBASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Gm18061-201ENSMUST00000208350 562 ntBASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Gm18063-201ENSMUST00000208529 568 ntBASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Gm18052-201ENSMUST00000208750 559 ntBASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb18Q91Y02 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms