Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb4Q91XZ6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Gm14057-201ENSMUST00000120631 482 ntBASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Gm38144-201ENSMUST00000192790 465 ntBASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Gm7730-201ENSMUST00000212486 454 ntBASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb4Q91XZ6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Gm16215-201ENSMUST00000161990 637 ntBASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Gm45841-201ENSMUST00000207700 164 ntBASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Syt7-205ENSMUST00000224135 1557 ntBASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb4Q91XZ6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms