Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Gm19931-201ENSMUST00000198920 368 ntBASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Gm15823-201ENSMUST00000064305 670 ntBASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb8Q91XZ2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Gm44397-201ENSMUST00000195950 113 ntBASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Pck2-205ENSMUST00000226352 2784 ntBASIC12.81□□□□□ -0.36
Pcdhb8Q91XZ2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Gm15429-201ENSMUST00000151268 798 ntBASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb8Q91XZ2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms